Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
RAPGEF3O95398 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC24.62■■□□□ 1.53
RAPGEF3O95398 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC24.62■■□□□ 1.53
RAPGEF3O95398 AC106872.11-201ENST00000605838 421 ntBASIC24.62■■□□□ 1.53
RAPGEF3O95398 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RAPGEF3O95398 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
RAPGEF3O95398 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 AL138781.2-201ENST00000617896 1843 ntBASIC24.61■■□□□ 1.53
RAPGEF3O95398 MPV17-206ENST00000402722 827 ntTSL 3 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 AL442647.2-201ENST00000429864 857 ntBASIC24.61■■□□□ 1.53
RAPGEF3O95398 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 COG4-212ENST00000564653 590 ntTSL 5 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 AC010328.2-201ENST00000597698 1111 ntBASIC24.61■■□□□ 1.53
RAPGEF3O95398 AC116353.5-201ENST00000638148 1699 ntBASIC24.61■■□□□ 1.53
RAPGEF3O95398 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC24.61■■□□□ 1.53
RAPGEF3O95398 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF3O95398 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC24.6■■□□□ 1.53
RAPGEF3O95398 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
RAPGEF3O95398 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 SLC25A24P2-201ENST00000415059 510 ntBASIC24.6■■□□□ 1.53
RAPGEF3O95398 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC24.6■■□□□ 1.53
RAPGEF3O95398 AC006033.1-201ENST00000440505 426 ntBASIC24.6■■□□□ 1.53
RAPGEF3O95398 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC24.6■■□□□ 1.53
RAPGEF3O95398 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RAPGEF3O95398 AC133539.2-201ENST00000604757 467 ntBASIC24.6■■□□□ 1.53
RAPGEF3O95398 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC24.6■■□□□ 1.53
RAPGEF3O95398 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
RAPGEF3O95398 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF3O95398 KRT8P39-201ENST00000396270 1433 ntBASIC24.6■■□□□ 1.53
RAPGEF3O95398 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC24.6■■□□□ 1.53
RAPGEF3O95398 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
RAPGEF3O95398 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 AC009113.1-201ENST00000570267 2443 ntBASIC24.59■■□□□ 1.53
RAPGEF3O95398 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 AL139010.1-201ENST00000454878 894 ntBASIC24.59■■□□□ 1.53
RAPGEF3O95398 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
RAPGEF3O95398 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC24.59■■□□□ 1.53
RAPGEF3O95398 AL359711.2-201ENST00000563105 872 ntBASIC24.59■■□□□ 1.53
RAPGEF3O95398 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC24.59■■□□□ 1.53
RAPGEF3O95398 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC24.59■■□□□ 1.53
RAPGEF3O95398 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC24.59■■□□□ 1.53
RAPGEF3O95398 AC013467.2-201ENST00000605472 835 ntBASIC24.59■■□□□ 1.53
RAPGEF3O95398 AL118558.3-201ENST00000607414 1079 ntBASIC24.59■■□□□ 1.53
RAPGEF3O95398 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
RAPGEF3O95398 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC24.59■■□□□ 1.53
RAPGEF3O95398 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC24.59■■□□□ 1.53
RAPGEF3O95398 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF3O95398 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF3O95398 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF3O95398 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF3O95398 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF3O95398 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF3O95398 AC026954.1-201ENST00000429771 1293 ntBASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms