Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM3O75382 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
TRIM3O75382 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM3O75382 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM3O75382 MRPL20P1-201ENST00000400819 433 ntBASIC15.65■□□□□ 0.1
TRIM3O75382 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM3O75382 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM3O75382 AC007967.2-201ENST00000432613 625 ntBASIC15.65■□□□□ 0.1
TRIM3O75382 VN2R19P-201ENST00000442399 1052 ntBASIC15.65■□□□□ 0.1
TRIM3O75382 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.65■□□□□ 0.1
TRIM3O75382 PGAM5P1-201ENST00000518923 814 ntBASIC15.65■□□□□ 0.1
TRIM3O75382 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM3O75382 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM3O75382 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM3O75382 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM3O75382 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM3O75382 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM3O75382 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM3O75382 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM3O75382 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM3O75382 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM3O75382 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TRIM3O75382 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRIM3O75382 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRIM3O75382 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM3O75382 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.64■□□□□ 0.09
TRIM3O75382 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM3O75382 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM3O75382 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRIM3O75382 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM3O75382 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM3O75382 CRYGEP-201ENST00000412192 528 ntBASIC15.64■□□□□ 0.09
TRIM3O75382 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM3O75382 PAWRP1-201ENST00000451083 565 ntBASIC15.64■□□□□ 0.09
TRIM3O75382 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
TRIM3O75382 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM3O75382 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM3O75382 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM3O75382 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 MIR4751-201ENST00000578027 74 ntBASIC15.64■□□□□ 0.09
TRIM3O75382 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM3O75382 AC064836.3-201ENST00000607928 673 ntBASIC15.64■□□□□ 0.09
TRIM3O75382 AC010654.1-201ENST00000615722 808 ntBASIC15.64■□□□□ 0.09
TRIM3O75382 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM3O75382 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM3O75382 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM3O75382 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM3O75382 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM3O75382 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM3O75382 AGGF1P2-201ENST00000426656 2106 ntBASIC15.64■□□□□ 0.09
TRIM3O75382 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM3O75382 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM3O75382 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM3O75382 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM3O75382 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM3O75382 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM3O75382 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
TRIM3O75382 HCG4B-203ENST00000450128 991 ntBASIC15.63■□□□□ 0.09
TRIM3O75382 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.63■□□□□ 0.09
TRIM3O75382 RNA5SP416-201ENST00000516838 111 ntBASIC15.63■□□□□ 0.09
TRIM3O75382 OR7E47P-204ENST00000575924 449 ntBASIC15.63■□□□□ 0.09
TRIM3O75382 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms