Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CTNSO60931 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.66■□□□□ 0.1
CTNSO60931 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTNSO60931 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTNSO60931 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTNSO60931 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.66■□□□□ 0.1
CTNSO60931 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.66■□□□□ 0.1
CTNSO60931 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTNSO60931 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTNSO60931 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.66■□□□□ 0.1
CTNSO60931 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CTNSO60931 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CTNSO60931 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTNSO60931 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTNSO60931 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTNSO60931 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTNSO60931 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.65■□□□□ 0.1
CTNSO60931 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.65■□□□□ 0.1
CTNSO60931 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.65■□□□□ 0.1
CTNSO60931 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CTNSO60931 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.65■□□□□ 0.1
CTNSO60931 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CTNSO60931 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.65■□□□□ 0.1
CTNSO60931 MKNK2P1-201ENST00000437526 628 ntBASIC15.65■□□□□ 0.1
CTNSO60931 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.65■□□□□ 0.1
CTNSO60931 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.65■□□□□ 0.1
CTNSO60931 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CTNSO60931 AL161645.1-201ENST00000622716 1255 ntBASIC15.65■□□□□ 0.1
CTNSO60931 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.65■□□□□ 0.1
CTNSO60931 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.65■□□□□ 0.1
CTNSO60931 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTNSO60931 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.65■□□□□ 0.1
CTNSO60931 HLA-A-202ENST00000376806 1854 ntBASIC15.65■□□□□ 0.1
CTNSO60931 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.65■□□□□ 0.1
CTNSO60931 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.65■□□□□ 0.1
CTNSO60931 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.64■□□□□ 0.09
CTNSO60931 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CTNSO60931 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.64■□□□□ 0.09
CTNSO60931 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.64■□□□□ 0.09
CTNSO60931 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.64■□□□□ 0.09
CTNSO60931 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.64■□□□□ 0.09
CTNSO60931 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CTNSO60931 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.64■□□□□ 0.09
CTNSO60931 FAM58CP-201ENST00000435741 640 ntBASIC15.64■□□□□ 0.09
CTNSO60931 ACTG1P14-201ENST00000446382 1122 ntBASIC15.64■□□□□ 0.09
CTNSO60931 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CTNSO60931 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CTNSO60931 AC092865.5-201ENST00000545435 363 ntBASIC15.64■□□□□ 0.09
CTNSO60931 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 AC005829.1-201ENST00000570002 483 ntBASIC15.64■□□□□ 0.09
CTNSO60931 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CTNSO60931 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.64■□□□□ 0.09
CTNSO60931 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.64■□□□□ 0.09
CTNSO60931 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.64■□□□□ 0.09
CTNSO60931 AC091812.2-201ENST00000619081 385 ntBASIC15.64■□□□□ 0.09
CTNSO60931 FLJ38576-201ENST00000623820 2459 ntBASIC15.64■□□□□ 0.09
CTNSO60931 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.64■□□□□ 0.09
CTNSO60931 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.64■□□□□ 0.09
CTNSO60931 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.64■□□□□ 0.09
CTNSO60931 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CTNSO60931 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.64■□□□□ 0.09
CTNSO60931 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.64■□□□□ 0.09
CTNSO60931 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.64■□□□□ 0.09
CTNSO60931 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTNSO60931 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.64■□□□□ 0.09
CTNSO60931 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.64■□□□□ 0.09
CTNSO60931 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms