Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.21■□□□□ 0.35
TSPAN3O60637 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
TSPAN3O60637 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.21■□□□□ 0.35
TSPAN3O60637 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TSPAN3O60637 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 AL139400.1-201ENST00000366220 510 ntBASIC17.21■□□□□ 0.35
TSPAN3O60637 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.21■□□□□ 0.35
TSPAN3O60637 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.21■□□□□ 0.35
TSPAN3O60637 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.21■□□□□ 0.35
TSPAN3O60637 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.21■□□□□ 0.35
TSPAN3O60637 AC093520.2-201ENST00000561830 333 ntBASIC17.21■□□□□ 0.35
TSPAN3O60637 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.21■□□□□ 0.35
TSPAN3O60637 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.21■□□□□ 0.35
TSPAN3O60637 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.21■□□□□ 0.35
TSPAN3O60637 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.21■□□□□ 0.35
TSPAN3O60637 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 AL645728.1-201ENST00000366221 2101 ntBASIC17.21■□□□□ 0.35
TSPAN3O60637 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TSPAN3O60637 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.21■□□□□ 0.35
TSPAN3O60637 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSPAN3O60637 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TSPAN3O60637 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TSPAN3O60637 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TSPAN3O60637 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TSPAN3O60637 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TSPAN3O60637 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TSPAN3O60637 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.2■□□□□ 0.34
TSPAN3O60637 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.2■□□□□ 0.34
TSPAN3O60637 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TSPAN3O60637 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.2■□□□□ 0.34
TSPAN3O60637 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
TSPAN3O60637 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.2■□□□□ 0.34
TSPAN3O60637 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.2■□□□□ 0.34
TSPAN3O60637 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.2■□□□□ 0.34
TSPAN3O60637 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 TSEN15P1-201ENST00000423257 515 ntBASIC17.2■□□□□ 0.34
TSPAN3O60637 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.2■□□□□ 0.34
TSPAN3O60637 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.2■□□□□ 0.34
TSPAN3O60637 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TSPAN3O60637 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
TSPAN3O60637 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.2■□□□□ 0.34
TSPAN3O60637 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.2■□□□□ 0.34
TSPAN3O60637 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.2■□□□□ 0.34
TSPAN3O60637 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 WASH6P-202ENST00000359512 1437 ntBASIC17.2■□□□□ 0.34
TSPAN3O60637 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TSPAN3O60637 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.2■□□□□ 0.34
TSPAN3O60637 AKAP8P1-201ENST00000434743 1349 ntBASIC17.2■□□□□ 0.34
TSPAN3O60637 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.2■□□□□ 0.34
TSPAN3O60637 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSPAN3O60637 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.19■□□□□ 0.34
TSPAN3O60637 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TSPAN3O60637 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TSPAN3O60637 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.19■□□□□ 0.34
TSPAN3O60637 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
TSPAN3O60637 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSPAN3O60637 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TSPAN3O60637 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.19■□□□□ 0.34
TSPAN3O60637 SPCS2P4-201ENST00000436160 681 ntBASIC17.19■□□□□ 0.34
TSPAN3O60637 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.19■□□□□ 0.34
TSPAN3O60637 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSPAN3O60637 RN7SL589P-201ENST00000481268 310 ntBASIC17.19■□□□□ 0.34
TSPAN3O60637 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.19■□□□□ 0.34
TSPAN3O60637 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms