Protein–RNA interactions for Protein: O60423

ATP8B3, Phospholipid-transporting ATPase IK, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8B3O60423 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
ATP8B3O60423 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP8B3O60423 IGLL3P-201ENST00000412472 434 ntBASIC18.03■□□□□ 0.48
ATP8B3O60423 BX842568.4-201ENST00000421222 227 ntBASIC18.03■□□□□ 0.48
ATP8B3O60423 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP8B3O60423 PGAM5P1-201ENST00000518923 814 ntBASIC18.03■□□□□ 0.48
ATP8B3O60423 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP8B3O60423 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP8B3O60423 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP8B3O60423 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP8B3O60423 AC010507.1-201ENST00000633895 436 ntBASIC18.03■□□□□ 0.48
ATP8B3O60423 AC007064.4-201ENST00000637740 555 ntBASIC18.03■□□□□ 0.48
ATP8B3O60423 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP8B3O60423 AC006277.1-201ENST00000624348 1610 ntBASIC18.03■□□□□ 0.48
ATP8B3O60423 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP8B3O60423 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
ATP8B3O60423 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP8B3O60423 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.03■□□□□ 0.48
ATP8B3O60423 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP8B3O60423 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ATP8B3O60423 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP8B3O60423 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.02■□□□□ 0.48
ATP8B3O60423 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP8B3O60423 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ATP8B3O60423 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ATP8B3O60423 AC023511.2-201ENST00000618803 211 ntBASIC18.02■□□□□ 0.48
ATP8B3O60423 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP8B3O60423 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ATP8B3O60423 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP8B3O60423 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP8B3O60423 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
ATP8B3O60423 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP8B3O60423 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP8B3O60423 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP8B3O60423 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ATP8B3O60423 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP8B3O60423 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP8B3O60423 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP8B3O60423 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.02■□□□□ 0.47
ATP8B3O60423 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP8B3O60423 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
ATP8B3O60423 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
ATP8B3O60423 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ATP8B3O60423 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ATP8B3O60423 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP8B3O60423 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP8B3O60423 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ATP8B3O60423 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP8B3O60423 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP8B3O60423 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP8B3O60423 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP8B3O60423 AC018845.2-201ENST00000568326 409 ntBASIC18.01■□□□□ 0.47
ATP8B3O60423 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP8B3O60423 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP8B3O60423 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ATP8B3O60423 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP8B3O60423 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.01■□□□□ 0.47
ATP8B3O60423 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
ATP8B3O60423 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ATP8B3O60423 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP8B3O60423 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ATP8B3O60423 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP8B3O60423 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms