Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF113AO15541 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF113AO15541 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20■□□□□ 0.79
RNF113AO15541 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.99■□□□□ 0.79
RNF113AO15541 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RNF113AO15541 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
RNF113AO15541 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF113AO15541 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF113AO15541 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 AC243562.1-201ENST00000560672 389 ntBASIC19.99■□□□□ 0.79
RNF113AO15541 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF113AO15541 AC026120.1-201ENST00000611536 926 ntBASIC19.99■□□□□ 0.79
RNF113AO15541 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RNF113AO15541 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RNF113AO15541 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF113AO15541 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF113AO15541 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF113AO15541 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF113AO15541 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RNF113AO15541 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF113AO15541 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF113AO15541 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF113AO15541 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF113AO15541 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF113AO15541 KRT18P34-201ENST00000488218 1270 ntBASIC19.98■□□□□ 0.79
RNF113AO15541 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
RNF113AO15541 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF113AO15541 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF113AO15541 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF113AO15541 AC139530.3-201ENST00000620344 690 ntBASIC19.98■□□□□ 0.79
RNF113AO15541 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RNF113AO15541 AC105339.1-204ENST00000636249 355 ntBASIC19.98■□□□□ 0.79
RNF113AO15541 AC134684.3-201ENST00000641758 218 ntBASIC19.98■□□□□ 0.79
RNF113AO15541 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
RNF113AO15541 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF113AO15541 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
RNF113AO15541 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF113AO15541 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF113AO15541 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
RNF113AO15541 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF113AO15541 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF113AO15541 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF113AO15541 SPDYE11-202ENST00000450699 704 ntBASIC19.97■□□□□ 0.79
RNF113AO15541 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
RNF113AO15541 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF113AO15541 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
RNF113AO15541 SPDYE9P-201ENST00000570642 692 ntBASIC19.97■□□□□ 0.79
RNF113AO15541 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF113AO15541 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.97■□□□□ 0.79
RNF113AO15541 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF113AO15541 SPDYE10P-202ENST00000612005 668 ntBASIC19.97■□□□□ 0.79
RNF113AO15541 SPDYE8P-202ENST00000612377 668 ntBASIC19.97■□□□□ 0.79
RNF113AO15541 AC020765.3-201ENST00000613051 740 ntBASIC19.97■□□□□ 0.79
RNF113AO15541 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF113AO15541 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
RNF113AO15541 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF113AO15541 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF113AO15541 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms