Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
UPK1AO00322 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
UPK1AO00322 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.87■□□□□ 0.13
UPK1AO00322 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.87■□□□□ 0.13
UPK1AO00322 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 AF186996.4-201ENST00000467186 377 ntBASIC15.87■□□□□ 0.13
UPK1AO00322 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.87■□□□□ 0.13
UPK1AO00322 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.87■□□□□ 0.13
UPK1AO00322 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.87■□□□□ 0.13
UPK1AO00322 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
UPK1AO00322 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
UPK1AO00322 AL031008.1-201ENST00000619963 541 ntBASIC15.87■□□□□ 0.13
UPK1AO00322 AC148477.8-201ENST00000624298 468 ntBASIC15.87■□□□□ 0.13
UPK1AO00322 AL805961.1-202ENST00000641562 540 ntBASIC15.87■□□□□ 0.13
UPK1AO00322 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
UPK1AO00322 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
UPK1AO00322 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
UPK1AO00322 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
UPK1AO00322 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.87■□□□□ 0.13
UPK1AO00322 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 AC005052.1-201ENST00000625181 2492 ntBASIC15.87■□□□□ 0.13
UPK1AO00322 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.87■□□□□ 0.13
UPK1AO00322 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 KRT8P49-201ENST00000604166 1432 ntBASIC15.86■□□□□ 0.13
UPK1AO00322 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.86■□□□□ 0.13
UPK1AO00322 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.86■□□□□ 0.13
UPK1AO00322 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.86■□□□□ 0.13
UPK1AO00322 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 AP002490.2-201ENST00000524791 560 ntBASIC15.86■□□□□ 0.13
UPK1AO00322 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.86■□□□□ 0.13
UPK1AO00322 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.86■□□□□ 0.13
UPK1AO00322 AC104692.2-201ENST00000603054 253 ntBASIC15.86■□□□□ 0.13
UPK1AO00322 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 AC008735.5-201ENST00000623544 497 ntBASIC15.86■□□□□ 0.13
UPK1AO00322 AF228730.7-201ENST00000641842 219 ntBASIC15.86■□□□□ 0.13
UPK1AO00322 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UPK1AO00322 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
UPK1AO00322 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
UPK1AO00322 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
UPK1AO00322 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
UPK1AO00322 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms