Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 AC243562.1-201ENST00000560672 389 ntBASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 AKAP8P1-201ENST00000434743 1349 ntBASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.39■□□□□ 0.37
YJEFN3A6XGL0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 DNAJB3-202ENST00000449667 1266 ntBASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 TIMM8BP1-201ENST00000452384 211 ntBASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 AC022145.2-201ENST00000598203 171 ntBASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 AL513210.1-201ENST00000629608 234 ntBASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 GPAA1P2-202ENST00000606848 1787 ntBASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
YJEFN3A6XGL0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 SPDYE11-202ENST00000450699 704 ntBASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 AC079140.1-201ENST00000508039 487 ntBASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 SPDYE9P-201ENST00000570642 692 ntBASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 AL596442.2-201ENST00000610240 980 ntBASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 SPDYE10P-202ENST00000612005 668 ntBASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 SPDYE8P-202ENST00000612377 668 ntBASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.37■□□□□ 0.37
YJEFN3A6XGL0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YJEFN3A6XGL0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
YJEFN3A6XGL0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms