Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 AC006277.1-201ENST00000624348 1610 ntBASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 AF186996.4-201ENST00000467186 377 ntBASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 HLA-J-202ENST00000469281 1241 ntBASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 MIR1199-201ENST00000621445 119 ntBASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 AC008735.5-201ENST00000623544 497 ntBASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 AL139011.1-202ENST00000642063 584 ntBASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA11Q9Y5H2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA11Q9Y5H2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA11Q9Y5H2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.27■□□□□ 0.19
PCDHGA11Q9Y5H2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA11Q9Y5H2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA11Q9Y5H2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PCDHGA11Q9Y5H2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA11Q9Y5H2 HLA-A-202ENST00000376806 1854 ntBASIC16.27■□□□□ 0.19
PCDHGA11Q9Y5H2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PCDHGA11Q9Y5H2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 AC002310.6-201ENST00000624451 1377 ntBASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 AC004870.1-201ENST00000315132 882 ntBASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 AC073621.1-201ENST00000392730 636 ntBASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 FAAHP1-202ENST00000446499 1238 ntBASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 RPS15P9-201ENST00000494093 319 ntBASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 PGM5P2-202ENST00000637225 1043 ntBASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA11Q9Y5H2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms