Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 AC123567.1-201ENST00000548294 1261 ntBASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 MIR4259-201ENST00000584466 101 ntBASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 SPDYE17-201ENST00000412399 783 ntBASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 AC124947.2-201ENST00000547118 1133 ntBASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 AC026979.3-201ENST00000607315 403 ntBASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTCBQ9Y3I0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 AC135050.7-201ENST00000624508 2218 ntBASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.85■□□□□ 0.93
RTCBQ9Y3I0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 TMEM14DP-201ENST00000422205 345 ntBASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 AL589987.1-201ENST00000453380 819 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms