Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 AC006504.4-201ENST00000592118 1568 ntBASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 KRT18P56-201ENST00000507275 550 ntBASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF11Q9Y3C5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 ALOX12P2-203ENST00000570921 1945 ntBASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF11Q9Y3C5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 AC006277.1-201ENST00000624348 1610 ntBASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 ELK2BP-201ENST00000415014 1224 ntBASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms