Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP3Q9Y2W7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 MIR662-201ENST00000384847 95 ntBASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 TSPY20P-201ENST00000450910 630 ntBASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 KRT8P10-201ENST00000450021 1447 ntBASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP3Q9Y2W7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms