Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 SLC25A1P3-201ENST00000395415 828 ntBASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 PCDHA12-202ENST00000613593 2588 ntBASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA1Q9UND3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.46■□□□□ 0.06
NPIPA1Q9UND3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPA1Q9UND3 AC022211.2-201ENST00000585075 2527 ntBASIC15.46■□□□□ 0.06
NPIPA1Q9UND3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPA1Q9UND3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.46■□□□□ 0.06
NPIPA1Q9UND3 EGFEM1P-202ENST00000431685 1563 ntBASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 AC060834.1-201ENST00000443027 2032 ntBASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 TSEN15P1-201ENST00000423257 515 ntBASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 AC112191.1-201ENST00000523689 701 ntBASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 AC004449.1-201ENST00000564240 433 ntBASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 REXO1L3P-201ENST00000622202 1288 ntBASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA1Q9UND3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 AC093028.1-201ENST00000622998 982 ntBASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 AC105339.1-204ENST00000636249 355 ntBASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms