Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 AC006538.1-201ENST00000567905 1585 ntBASIC21.17■□□□□ 0.98
SCN11AQ9UI33 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 AL589987.1-201ENST00000453380 819 ntBASIC21.16■□□□□ 0.98
SCN11AQ9UI33 FTH1-202ENST00000526640 786 ntTSL 2 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 AL136982.4-201ENST00000437689 1740 ntBASIC21.16■□□□□ 0.98
SCN11AQ9UI33 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.16■□□□□ 0.98
SCN11AQ9UI33 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 NME2P1-201ENST00000426182 414 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 RN7SL837P-201ENST00000463010 287 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 GIMAP3P-201ENST00000495150 836 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AC023310.3-201ENST00000557027 670 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AC100756.1-201ENST00000562736 682 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AC138749.3-201ENST00000567691 622 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AC132938.2-201ENST00000579188 680 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 SRD5A3P1-201ENST00000603021 949 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 CHCHD2P3-201ENST00000603038 451 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AL391069.4-201ENST00000609583 481 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AC116165.1-201ENST00000611806 668 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AC004461.2-201ENST00000629517 803 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AL591163.1-201ENST00000641757 987 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AC018470.1-201ENST00000624790 3129 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AC093004.1-201ENST00000508850 424 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 AL033527.5-202ENST00000641632 1098 ntBASIC21.15■□□□□ 0.98
SCN11AQ9UI33 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN11AQ9UI33 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
SCN11AQ9UI33 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCN11AQ9UI33 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.14■□□□□ 0.98
SCN11AQ9UI33 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SCN11AQ9UI33 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 AC026979.3-201ENST00000607315 403 ntBASIC21.14■□□□□ 0.97
SCN11AQ9UI33 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.14■□□□□ 0.97
SCN11AQ9UI33 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms