Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 AL603832.2-201ENST00000566195 2125 ntBASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 PRSS44-201ENST00000515154 1146 ntBASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 AP005242.2-201ENST00000580065 1175 ntBASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 LINC01023-201ENST00000606054 436 ntBASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 AC010947.1-201ENST00000623454 693 ntBASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 AL163051.1-201ENST00000569214 1512 ntBASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN2Q9UHD9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 LINC01311-201ENST00000565162 1445 ntBASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN2Q9UHD9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 AC009949.1-201ENST00000623048 1830 ntBASIC14.18□□□□□ -0.14
UBQLN2Q9UHD9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms