Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 HMGA1P7-201ENST00000406908 502 ntBASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 CNN2P11-201ENST00000429351 262 ntBASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 AC005412.3-201ENST00000580309 715 ntBASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLIP2Q9UDT6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLIP2Q9UDT6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.83■□□□□ 0.76
CLIP2Q9UDT6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLIP2Q9UDT6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CLIP2Q9UDT6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLIP2Q9UDT6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLIP2Q9UDT6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 AC112191.1-201ENST00000523689 701 ntBASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 DUX4L17-201ENST00000557360 1267 ntBASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 TOP3BP1-201ENST00000420768 1380 ntBASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CLIP2Q9UDT6 AC012569.1-201ENST00000591191 1524 ntBASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 AC140658.5-201ENST00000438532 169 ntBASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms