Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 RNA5SP421-201ENST00000516864 134 ntBASIC17.31■□□□□ 0.36
HPS4Q9NQG7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 AC008677.1-201ENST00000519230 1561 ntBASIC17.31■□□□□ 0.36
HPS4Q9NQG7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 SLC25A39P2-201ENST00000537614 270 ntBASIC17.3■□□□□ 0.36
HPS4Q9NQG7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HPS4Q9NQG7 AC093525.9-201ENST00000624961 1746 ntBASIC17.3■□□□□ 0.36
HPS4Q9NQG7 PCDHA12-202ENST00000613593 2588 ntBASIC17.3■□□□□ 0.36
HPS4Q9NQG7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 PMS2P4-201ENST00000412466 1052 ntBASIC17.29■□□□□ 0.36
HPS4Q9NQG7 AC107890.1-201ENST00000422478 521 ntBASIC17.29■□□□□ 0.36
HPS4Q9NQG7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 AC125807.1-201ENST00000483097 614 ntBASIC17.29■□□□□ 0.36
HPS4Q9NQG7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS4Q9NQG7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 INGX-202ENST00000489074 768 ntBASIC17.28■□□□□ 0.36
HPS4Q9NQG7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.28■□□□□ 0.36
HPS4Q9NQG7 AC087641.1-201ENST00000557561 1021 ntBASIC17.28■□□□□ 0.36
HPS4Q9NQG7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms