Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 AC138035.3-201ENST00000622706 2791 ntBASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 AC113347.1-201ENST00000413321 391 ntBASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 AC005915.1-201ENST00000624912 2018 ntBASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C12orf4Q9NQ89 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 AC010460.3-201ENST00000511359 1579 ntBASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 AC015656.1-201ENST00000624209 3578 ntBASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 HOMER2P1-201ENST00000455653 964 ntBASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 AC005332.3-201ENST00000589904 676 ntBASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 AL390719.2-201ENST00000606993 987 ntBASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 AC139887.4-201ENST00000607877 719 ntBASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C12orf4Q9NQ89 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
C12orf4Q9NQ89 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
C12orf4Q9NQ89 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C12orf4Q9NQ89 AC092384.3-202ENST00000564646 2873 ntBASIC14.64□□□□□ -0.07
C12orf4Q9NQ89 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
C12orf4Q9NQ89 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C12orf4Q9NQ89 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C12orf4Q9NQ89 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
C12orf4Q9NQ89 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C12orf4Q9NQ89 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
C12orf4Q9NQ89 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms