Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 PRELID1P1-202ENST00000567272 903 ntBASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 BNIP3P18-201ENST00000593976 575 ntBASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
AMBRA1Q9C0C7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
AMBRA1Q9C0C7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AMBRA1Q9C0C7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
AMBRA1Q9C0C7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.71■□□□□ 0.1
AMBRA1Q9C0C7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AMBRA1Q9C0C7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AC006538.1-201ENST00000567905 1585 ntBASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AL020989.1-201ENST00000422979 469 ntBASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 MINOS1P3-201ENST00000457048 203 ntBASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AC012313.10-201ENST00000623509 926 ntBASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AP000867.4-201ENST00000641616 219 ntBASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 AC004817.3-201ENST00000602957 2129 ntBASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AMBRA1Q9C0C7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 LINC00895-201ENST00000629028 1637 ntBASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 TSPY19P-201ENST00000418461 509 ntBASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 POM121L3P-201ENST00000419331 1163 ntBASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 TSPY18P-201ENST00000441642 509 ntBASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 AC096582.2-201ENST00000510860 516 ntBASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 GPALPP1-207ENST00000611650 899 ntBASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.69■□□□□ 0.1
AMBRA1Q9C0C7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms