Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 SLC7A15P-201ENST00000424028 1363 ntBASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 AC017083.2-201ENST00000608069 979 ntBASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 AC011495.1-201ENST00000498085 584 ntBASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 MIR6799-201ENST00000620297 69 ntBASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTFDC1Q9BY42 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 KRT8P12-202ENST00000472924 1397 ntBASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RTFDC1Q9BY42 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 MIR1909-201ENST00000411312 80 ntBASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 RPS2P32-201ENST00000439199 892 ntBASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms