Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 AL645728.1-201ENST00000366221 2101 ntBASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 AL135744.1-201ENST00000565098 629 ntBASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 AKAP8P1-201ENST00000434743 1349 ntBASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPAP1Q9BWH6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 MIR4515-201ENST00000584082 81 ntBASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 AL353732.1-201ENST00000569618 1459 ntBASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
RPAP1Q9BWH6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 AC079140.1-201ENST00000508039 487 ntBASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 Z92544.3-201ENST00000624747 417 ntBASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.22■□□□□ 0.83
RPAP1Q9BWH6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms