Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.72■□□□□ 0.43
RAD9AQ99638 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.72■□□□□ 0.43
RAD9AQ99638 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.72■□□□□ 0.43
RAD9AQ99638 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.71■□□□□ 0.43
RAD9AQ99638 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.71■□□□□ 0.43
RAD9AQ99638 AC005332.8-201ENST00000622750 2735 ntBASIC17.71■□□□□ 0.43
RAD9AQ99638 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAD9AQ99638 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RAD9AQ99638 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.71■□□□□ 0.43
RAD9AQ99638 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.71■□□□□ 0.43
RAD9AQ99638 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.71■□□□□ 0.43
RAD9AQ99638 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAD9AQ99638 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 TTTY23B-201ENST00000442790 549 ntBASIC17.71■□□□□ 0.43
RAD9AQ99638 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 SPDYE18-201ENST00000510091 1050 ntBASIC17.71■□□□□ 0.43
RAD9AQ99638 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD9AQ99638 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.71■□□□□ 0.43
RAD9AQ99638 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.71■□□□□ 0.43
RAD9AQ99638 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD9AQ99638 SRD5A3P1-201ENST00000603021 949 ntBASIC17.71■□□□□ 0.43
RAD9AQ99638 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD9AQ99638 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD9AQ99638 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD9AQ99638 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAD9AQ99638 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAD9AQ99638 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RAD9AQ99638 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RAD9AQ99638 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RAD9AQ99638 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.71■□□□□ 0.42
RAD9AQ99638 AC116353.5-201ENST00000638148 1699 ntBASIC17.71■□□□□ 0.42
RAD9AQ99638 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.7■□□□□ 0.42
RAD9AQ99638 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.7■□□□□ 0.42
RAD9AQ99638 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.7■□□□□ 0.42
RAD9AQ99638 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.7■□□□□ 0.42
RAD9AQ99638 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAD9AQ99638 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.7■□□□□ 0.42
RAD9AQ99638 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAD9AQ99638 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.7■□□□□ 0.42
RAD9AQ99638 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.7■□□□□ 0.42
RAD9AQ99638 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.7■□□□□ 0.42
RAD9AQ99638 MYCLP2-201ENST00000449268 967 ntBASIC17.7■□□□□ 0.42
RAD9AQ99638 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RAD9AQ99638 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.7■□□□□ 0.42
RAD9AQ99638 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.7■□□□□ 0.42
RAD9AQ99638 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.7■□□□□ 0.42
RAD9AQ99638 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.7■□□□□ 0.42
RAD9AQ99638 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.7■□□□□ 0.42
RAD9AQ99638 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.7■□□□□ 0.42
RAD9AQ99638 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.7■□□□□ 0.42
RAD9AQ99638 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
RAD9AQ99638 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RAD9AQ99638 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.7■□□□□ 0.42
RAD9AQ99638 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAD9AQ99638 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.69■□□□□ 0.42
RAD9AQ99638 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.69■□□□□ 0.42
RAD9AQ99638 AC020916.1-201ENST00000587762 1774 ntBASIC17.69■□□□□ 0.42
RAD9AQ99638 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.69■□□□□ 0.42
RAD9AQ99638 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
RAD9AQ99638 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RAD9AQ99638 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RAD9AQ99638 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms