Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A4EQ96PG1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 RNA5SP419-201ENST00000515908 135 ntBASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 AC116407.3-201ENST00000623905 1129 ntBASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 GGT3P-204ENST00000453783 1664 ntBASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 AL671710.1-201ENST00000610245 2349 ntBASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 AL512652.2-201ENST00000625156 1716 ntBASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MS4A4EQ96PG1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 ACTL9-202ENST00000612068 1252 ntBASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A4EQ96PG1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms