Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.83□□□□□ -0.04
APH1AQ96BI3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 AL031055.1-201ENST00000606362 631 ntBASIC14.83□□□□□ -0.04
APH1AQ96BI3 AL078644.1-201ENST00000609881 752 ntBASIC14.83□□□□□ -0.04
APH1AQ96BI3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 AC092919.2-201ENST00000623631 1645 ntBASIC14.83□□□□□ -0.04
APH1AQ96BI3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.82□□□□□ -0.04
APH1AQ96BI3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 RNU1-129P-201ENST00000384064 167 ntBASIC14.82□□□□□ -0.04
APH1AQ96BI3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 MKNK2P1-201ENST00000437526 628 ntBASIC14.82□□□□□ -0.04
APH1AQ96BI3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 AP002472.1-201ENST00000577490 586 ntBASIC14.82□□□□□ -0.04
APH1AQ96BI3 U1.21-201ENST00000580816 167 ntBASIC14.82□□□□□ -0.04
APH1AQ96BI3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 AC091812.2-201ENST00000619081 385 ntBASIC14.82□□□□□ -0.04
APH1AQ96BI3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APH1AQ96BI3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APH1AQ96BI3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 RPSAP43-201ENST00000402237 625 ntBASIC14.81□□□□□ -0.04
APH1AQ96BI3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 PMS2P4-201ENST00000412466 1052 ntBASIC14.81□□□□□ -0.04
APH1AQ96BI3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 HTR5BP-201ENST00000430851 1154 ntBASIC14.81□□□□□ -0.04
APH1AQ96BI3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 ACTG1P14-201ENST00000446382 1122 ntBASIC14.81□□□□□ -0.04
APH1AQ96BI3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms