Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRQ92834 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRQ92834 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRQ92834 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRQ92834 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRQ92834 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRQ92834 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.46■□□□□ 0.87
RPGRQ92834 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.46■□□□□ 0.87
RPGRQ92834 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.46■□□□□ 0.87
RPGRQ92834 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.46■□□□□ 0.87
RPGRQ92834 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.46■□□□□ 0.87
RPGRQ92834 GNAQP1-201ENST00000444815 1067 ntBASIC20.46■□□□□ 0.87
RPGRQ92834 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
RPGRQ92834 AC104794.3-201ENST00000566840 1248 ntBASIC20.46■□□□□ 0.87
RPGRQ92834 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.46■□□□□ 0.87
RPGRQ92834 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.46■□□□□ 0.87
RPGRQ92834 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPGRQ92834 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.46■□□□□ 0.87
RPGRQ92834 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
RPGRQ92834 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.45■□□□□ 0.86
RPGRQ92834 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.45■□□□□ 0.86
RPGRQ92834 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RPGRQ92834 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 AC098614.1-201ENST00000368528 745 ntBASIC20.45■□□□□ 0.86
RPGRQ92834 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
RPGRQ92834 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 ARSEP1-201ENST00000420443 635 ntBASIC20.45■□□□□ 0.86
RPGRQ92834 U91328.1-201ENST00000437528 223 ntBASIC20.45■□□□□ 0.86
RPGRQ92834 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.45■□□□□ 0.86
RPGRQ92834 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RPGRQ92834 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.45■□□□□ 0.86
RPGRQ92834 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RPGRQ92834 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.45■□□□□ 0.86
RPGRQ92834 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.45■□□□□ 0.86
RPGRQ92834 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.45■□□□□ 0.86
RPGRQ92834 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.45■□□□□ 0.86
RPGRQ92834 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.45■□□□□ 0.86
RPGRQ92834 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPGRQ92834 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RPGRQ92834 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.44■□□□□ 0.86
RPGRQ92834 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.44■□□□□ 0.86
RPGRQ92834 BTBD7P1-201ENST00000447253 1453 ntBASIC20.44■□□□□ 0.86
RPGRQ92834 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.44■□□□□ 0.86
RPGRQ92834 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.44■□□□□ 0.86
RPGRQ92834 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRQ92834 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRQ92834 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.44■□□□□ 0.86
RPGRQ92834 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.44■□□□□ 0.86
RPGRQ92834 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRQ92834 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRQ92834 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RPGRQ92834 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.44■□□□□ 0.86
RPGRQ92834 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.44■□□□□ 0.86
RPGRQ92834 DFFBP1-201ENST00000433250 979 ntBASIC20.44■□□□□ 0.86
RPGRQ92834 GPR53P-205ENST00000457298 1084 ntBASIC20.44■□□□□ 0.86
RPGRQ92834 RN7SL618P-201ENST00000477850 296 ntBASIC20.44■□□□□ 0.86
RPGRQ92834 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRQ92834 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RPGRQ92834 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.44■□□□□ 0.86
RPGRQ92834 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRQ92834 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRQ92834 KRT8P39-201ENST00000396270 1433 ntBASIC20.44■□□□□ 0.86
RPGRQ92834 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRQ92834 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
RPGRQ92834 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RPGRQ92834 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRQ92834 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRQ92834 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRQ92834 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRQ92834 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRQ92834 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRQ92834 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.43■□□□□ 0.86
RPGRQ92834 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.43■□□□□ 0.86
RPGRQ92834 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.43■□□□□ 0.86
RPGRQ92834 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.43■□□□□ 0.86
RPGRQ92834 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
RPGRQ92834 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.43■□□□□ 0.86
RPGRQ92834 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.43■□□□□ 0.86
RPGRQ92834 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms