Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 AC091812.2-201ENST00000619081 385 ntBASIC15.84■□□□□ 0.13
TM9SF4Q92544 LINC01451-201ENST00000623792 534 ntBASIC15.84■□□□□ 0.13
TM9SF4Q92544 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 AL162727.3-201ENST00000635661 2787 ntBASIC15.84■□□□□ 0.13
TM9SF4Q92544 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
TM9SF4Q92544 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF4Q92544 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TM9SF4Q92544 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TM9SF4Q92544 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TM9SF4Q92544 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TM9SF4Q92544 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TM9SF4Q92544 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.83■□□□□ 0.13
TM9SF4Q92544 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 AC112191.1-201ENST00000523689 701 ntBASIC15.83■□□□□ 0.12
TM9SF4Q92544 AL031432.2-201ENST00000566714 459 ntBASIC15.83■□□□□ 0.12
TM9SF4Q92544 AL928711.1-201ENST00000570165 459 ntBASIC15.83■□□□□ 0.12
TM9SF4Q92544 OR7E47P-204ENST00000575924 449 ntBASIC15.83■□□□□ 0.12
TM9SF4Q92544 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 AC011467.4-201ENST00000594891 528 ntBASIC15.83■□□□□ 0.12
TM9SF4Q92544 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM9SF4Q92544 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TM9SF4Q92544 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 DOC2GP-204ENST00000639052 2548 ntBASIC15.82■□□□□ 0.12
TM9SF4Q92544 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 TSEN15P1-201ENST00000423257 515 ntBASIC15.82■□□□□ 0.12
TM9SF4Q92544 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 REXO1L3P-201ENST00000622202 1288 ntBASIC15.82■□□□□ 0.12
TM9SF4Q92544 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms