Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 GAPDHP21-201ENST00000450301 1010 ntBASIC25.52■■□□□ 1.68
CCNB3Q8WWL7 TMPRSS11CP-201ENST00000453277 683 ntBASIC25.52■■□□□ 1.68
CCNB3Q8WWL7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCNB3Q8WWL7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC25.52■■□□□ 1.68
CCNB3Q8WWL7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC25.52■■□□□ 1.68
CCNB3Q8WWL7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCNB3Q8WWL7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC25.52■■□□□ 1.68
CCNB3Q8WWL7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC25.52■■□□□ 1.68
CCNB3Q8WWL7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CCNB3Q8WWL7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC25.52■■□□□ 1.68
CCNB3Q8WWL7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
CCNB3Q8WWL7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 AC063926.2-201ENST00000623766 1308 ntBASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 SPDYE22P-201ENST00000582158 798 ntBASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 AC009118.2-201ENST00000613275 655 ntBASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNB3Q8WWL7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 AC106820.2-201ENST00000563775 3264 ntBASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 HNRNPA3P5-201ENST00000455201 833 ntBASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 BANF1P1-201ENST00000553684 263 ntBASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 AL603756.1-201ENST00000606511 2163 ntBASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 RNF216P1-203ENST00000404404 2427 ntBASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCNB3Q8WWL7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 AC244107.1-201ENST00000442033 332 ntBASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 AC009477.1-201ENST00000452936 217 ntBASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 FZD10-202ENST00000539839 3282 ntBASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNB3Q8WWL7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms