Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 MTHFR-217ENST00000641820 1569 ntBASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 ME2P1-201ENST00000426028 1970 ntBASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM3Q8TF72 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 AL645939.2-201ENST00000427340 991 ntBASIC17■□□□□ 0.31
SHROOM3Q8TF72 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 AL135744.1-201ENST00000565098 629 ntBASIC17■□□□□ 0.31
SHROOM3Q8TF72 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17■□□□□ 0.31
SHROOM3Q8TF72 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 AC006449.5-201ENST00000610658 2098 ntBASIC17■□□□□ 0.31
SHROOM3Q8TF72 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 TOP3BP1-201ENST00000420768 1380 ntBASIC17■□□□□ 0.31
SHROOM3Q8TF72 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 AP006288.1-201ENST00000446065 395 ntBASIC17■□□□□ 0.31
SHROOM3Q8TF72 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHROOM3Q8TF72 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17■□□□□ 0.31
SHROOM3Q8TF72 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 AC006538.1-201ENST00000567905 1585 ntBASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 AL512652.2-201ENST00000625156 1716 ntBASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms