Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 GGT3P-204ENST00000453783 1664 ntBASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 FAM8A6P-201ENST00000407496 1135 ntBASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 TSPY15P-201ENST00000457163 923 ntBASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNIH3Q8TBE1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 PPT1-215ENST00000641471 2368 ntBASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 MMP23A-201ENST00000234610 1017 ntBASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 AC005332.3-201ENST00000589904 676 ntBASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 PKD1P5-201ENST00000532415 10291 ntBASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 AC125634.1-201ENST00000438758 1403 ntBASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
CNIH3Q8TBE1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CNIH3Q8TBE1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNIH3Q8TBE1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNIH3Q8TBE1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.33■□□□□ 0.05
CNIH3Q8TBE1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms