Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 RN7SL752P-201ENST00000463779 287 ntBASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 AC104794.3-201ENST00000566840 1248 ntBASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 AL138918.1-201ENST00000568306 659 ntBASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 AC073389.1-201ENST00000595595 795 ntBASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 AL844908.2-201ENST00000609461 460 ntBASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 TEX28P1-201ENST00000613479 1221 ntBASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 TEX28P2-201ENST00000617764 1221 ntBASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 AC009113.1-201ENST00000570267 2443 ntBASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNIP1Q8TAD8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 WIZP1-201ENST00000531444 2299 ntBASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 DGCR5-201ENST00000399539 862 ntBASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 AP001350.2-201ENST00000625104 1094 ntBASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms