Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 AC092171.3-201ENST00000610122 2651 ntBASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT1Q8NF37 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 HLA-A-202ENST00000376806 1854 ntBASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LPCAT1Q8NF37 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 SNX33P1-201ENST00000592116 1762 ntBASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 AC079328.2-201ENST00000561241 3354 ntBASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 PMS2P7-201ENST00000506558 1336 ntBASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LPCAT1Q8NF37 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.86■□□□□ 0.29
LPCAT1Q8NF37 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
LPCAT1Q8NF37 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms