Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 AL035456.1-201ENST00000456064 1369 ntBASIC20.46■□□□□ 0.87
RTL9Q8NET4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 AL645728.1-201ENST00000366221 2101 ntBASIC20.46■□□□□ 0.87
RTL9Q8NET4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 GK-202ENST00000378941 458 ntTSL 3 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 AL138828.2-201ENST00000615812 383 ntBASIC20.46■□□□□ 0.87
RTL9Q8NET4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
RTL9Q8NET4 PCDHB18P-201ENST00000524813 2368 ntBASIC20.45■□□□□ 0.86
RTL9Q8NET4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 AC093724.1-201ENST00000448659 1027 ntBASIC20.45■□□□□ 0.86
RTL9Q8NET4 MEIS3P1-201ENST00000495167 958 ntBASIC20.45■□□□□ 0.86
RTL9Q8NET4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 AL590560.3-201ENST00000623350 461 ntBASIC20.45■□□□□ 0.86
RTL9Q8NET4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL9Q8NET4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.45■□□□□ 0.86
RTL9Q8NET4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.44■□□□□ 0.86
RTL9Q8NET4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 AL353705.2-201ENST00000428243 662 ntBASIC20.44■□□□□ 0.86
RTL9Q8NET4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms