Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 AL645728.1-201ENST00000366221 2101 ntBASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 LAGE3P1-201ENST00000425356 484 ntBASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 PAWRP1-201ENST00000451083 565 ntBASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 AL021920.2-201ENST00000624828 1351 ntBASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF439Q8NDP4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 KRT8P49-201ENST00000604166 1432 ntBASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 DUSP5P1-201ENST00000441325 1139 ntBASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 AC107918.4-202ENST00000641623 219 ntBASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF439Q8NDP4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms