Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 DGCR5-201ENST00000399539 862 ntBASIC13.08□□□□□ -0.32
C3orf56Q8N813 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 AL353705.2-201ENST00000428243 662 ntBASIC13.08□□□□□ -0.32
C3orf56Q8N813 DFFBP1-201ENST00000433250 979 ntBASIC13.08□□□□□ -0.32
C3orf56Q8N813 SLC25A6P5-201ENST00000435663 894 ntBASIC13.08□□□□□ -0.32
C3orf56Q8N813 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 MTND6P24-201ENST00000440466 518 ntBASIC13.08□□□□□ -0.32
C3orf56Q8N813 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 AC104794.3-201ENST00000566840 1248 ntBASIC13.08□□□□□ -0.32
C3orf56Q8N813 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 AC132938.2-201ENST00000579188 680 ntBASIC13.08□□□□□ -0.32
C3orf56Q8N813 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.08□□□□□ -0.32
C3orf56Q8N813 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 AL591163.1-201ENST00000641757 987 ntBASIC13.08□□□□□ -0.32
C3orf56Q8N813 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 CETN4P-206ENST00000642099 2168 ntBASIC13.08□□□□□ -0.32
C3orf56Q8N813 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.08□□□□□ -0.32
C3orf56Q8N813 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
C3orf56Q8N813 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 AC105233.2-201ENST00000523697 349 ntBASIC13.07□□□□□ -0.32
C3orf56Q8N813 AF228730.5-201ENST00000530288 346 ntBASIC13.07□□□□□ -0.32
C3orf56Q8N813 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.07□□□□□ -0.32
C3orf56Q8N813 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.07□□□□□ -0.32
C3orf56Q8N813 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.07□□□□□ -0.32
C3orf56Q8N813 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.07□□□□□ -0.32
C3orf56Q8N813 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 AC016027.1-202ENST00000607927 1699 ntBASIC13.07□□□□□ -0.32
C3orf56Q8N813 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 AC087499.5-201ENST00000452760 1342 ntBASIC13.07□□□□□ -0.32
C3orf56Q8N813 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 AP3S2-216ENST00000617003 1561 ntBASIC13.07□□□□□ -0.32
C3orf56Q8N813 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
C3orf56Q8N813 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
C3orf56Q8N813 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C3orf56Q8N813 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms