Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.27□□□□□ -0.28
TTC9CQ8N5M4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TTC9CQ8N5M4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TTC9CQ8N5M4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
TTC9CQ8N5M4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TTC9CQ8N5M4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 AL031284.1-201ENST00000419297 478 ntBASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 AL353732.1-201ENST00000569618 1459 ntBASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 AP002414.3-201ENST00000589352 1468 ntBASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 HLA-A-202ENST00000376806 1854 ntBASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 PCDHA14-201ENST00000506751 2298 ntBASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
TTC9CQ8N5M4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 MRPL20P1-201ENST00000400819 433 ntBASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 AC093909.1-201ENST00000504731 1122 ntBASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 AL662844.1-201ENST00000546340 181 ntBASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 AC005412.3-201ENST00000580309 715 ntBASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 MIR4492-201ENST00000581627 80 ntBASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms