Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 AC096734.2-201ENST00000562054 433 ntBASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF2Q8N5M1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 SNX33P1-201ENST00000592116 1762 ntBASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 MED15P5-201ENST00000423150 992 ntBASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 AC106730.1-201ENST00000566722 1090 ntBASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 MIR4515-201ENST00000584082 81 ntBASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 AL671710.1-201ENST00000610245 2349 ntBASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF2Q8N5M1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 KRT8P39-201ENST00000396270 1433 ntBASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 AC099398.1-201ENST00000567919 2776 ntBASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 AL645728.2-201ENST00000641974 660 ntBASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ATPAF2Q8N5M1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
ATPAF2Q8N5M1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms