Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.11■□□□□ 0.33
SIX5Q8N196 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 SLC22A20-204ENST00000530038 1673 ntBASIC17.11■□□□□ 0.33
SIX5Q8N196 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SIX5Q8N196 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
SIX5Q8N196 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SIX5Q8N196 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.11■□□□□ 0.33
SIX5Q8N196 MIR1909-201ENST00000411312 80 ntBASIC17.11■□□□□ 0.33
SIX5Q8N196 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.11■□□□□ 0.33
SIX5Q8N196 RN7SL752P-201ENST00000463779 287 ntBASIC17.11■□□□□ 0.33
SIX5Q8N196 AC105233.2-201ENST00000523697 349 ntBASIC17.11■□□□□ 0.33
SIX5Q8N196 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SIX5Q8N196 AF228730.5-201ENST00000530288 346 ntBASIC17.11■□□□□ 0.33
SIX5Q8N196 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
SIX5Q8N196 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.11■□□□□ 0.33
SIX5Q8N196 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
SIX5Q8N196 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SIX5Q8N196 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.11■□□□□ 0.33
SIX5Q8N196 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SIX5Q8N196 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIX5Q8N196 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SIX5Q8N196 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.1■□□□□ 0.33
SIX5Q8N196 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SIX5Q8N196 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.1■□□□□ 0.33
SIX5Q8N196 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.1■□□□□ 0.33
SIX5Q8N196 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SIX5Q8N196 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.1■□□□□ 0.33
SIX5Q8N196 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SIX5Q8N196 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 DGCR5-201ENST00000399539 862 ntBASIC17.1■□□□□ 0.33
SIX5Q8N196 AL512384.1-201ENST00000406683 331 ntBASIC17.1■□□□□ 0.33
SIX5Q8N196 AP006294.1-201ENST00000415407 339 ntBASIC17.1■□□□□ 0.33
SIX5Q8N196 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.1■□□□□ 0.33
SIX5Q8N196 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.1■□□□□ 0.33
SIX5Q8N196 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.1■□□□□ 0.33
SIX5Q8N196 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.1■□□□□ 0.33
SIX5Q8N196 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.1■□□□□ 0.33
SIX5Q8N196 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.1■□□□□ 0.33
SIX5Q8N196 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.1■□□□□ 0.33
SIX5Q8N196 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.1■□□□□ 0.33
SIX5Q8N196 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.1■□□□□ 0.33
SIX5Q8N196 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.1■□□□□ 0.33
SIX5Q8N196 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.1■□□□□ 0.33
SIX5Q8N196 MIR6805-201ENST00000615055 62 ntBASIC17.1■□□□□ 0.33
SIX5Q8N196 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.1■□□□□ 0.33
SIX5Q8N196 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.1■□□□□ 0.33
SIX5Q8N196 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SIX5Q8N196 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.1■□□□□ 0.33
SIX5Q8N196 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SIX5Q8N196 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SIX5Q8N196 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.1■□□□□ 0.33
SIX5Q8N196 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.1■□□□□ 0.33
SIX5Q8N196 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
SIX5Q8N196 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX5Q8N196 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX5Q8N196 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX5Q8N196 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX5Q8N196 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.09■□□□□ 0.33
SIX5Q8N196 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SIX5Q8N196 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX5Q8N196 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIX5Q8N196 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SIX5Q8N196 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIX5Q8N196 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.09■□□□□ 0.33
SIX5Q8N196 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.09■□□□□ 0.33
SIX5Q8N196 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
SIX5Q8N196 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.09■□□□□ 0.33
SIX5Q8N196 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.09■□□□□ 0.33
SIX5Q8N196 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIX5Q8N196 ACA64.2-201ENST00000459014 129 ntBASIC17.09■□□□□ 0.33
SIX5Q8N196 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
SIX5Q8N196 AC091167.2-201ENST00000579581 588 ntBASIC17.09■□□□□ 0.33
SIX5Q8N196 TEX28P1-201ENST00000613479 1221 ntBASIC17.09■□□□□ 0.33
SIX5Q8N196 AL162274.1-201ENST00000617191 1098 ntBASIC17.09■□□□□ 0.33
SIX5Q8N196 TEX28P2-201ENST00000617764 1221 ntBASIC17.09■□□□□ 0.33
SIX5Q8N196 LINC01451-201ENST00000623792 534 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms