Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 AC006538.1-201ENST00000567905 1585 ntBASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 MIR4492-201ENST00000581627 80 ntBASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC116Q8IYX3 PCDHB19P-201ENST00000570871 2371 ntBASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 AL671710.1-201ENST00000610245 2349 ntBASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 SLC22A20-204ENST00000530038 1673 ntBASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 AL353732.1-201ENST00000569618 1459 ntBASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 UNC93B6-202ENST00000528242 690 ntBASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 MIR4751-201ENST00000578027 74 ntBASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 AC091167.2-201ENST00000579581 588 ntBASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 AL662844.4-201ENST00000606367 2838 ntBASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC116Q8IYX3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 AC079776.4-201ENST00000511039 504 ntBASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 RNA5SP415-201ENST00000517246 115 ntBASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 AC010654.1-201ENST00000615722 808 ntBASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 AL139011.1-202ENST00000642063 584 ntBASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms