Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 HIST3H2BA-201ENST00000436555 524 ntBASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDC42BPAQ5VT25 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 MIR658-201ENST00000385210 100 ntBASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CDC42BPAQ5VT25 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 AC007389.4-201ENST00000454674 793 ntBASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 ORC6-206ENST00000568364 888 ntTSL 5 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 AC093726.1-201ENST00000608064 963 ntBASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPAQ5VT25 AL603756.1-201ENST00000606511 2163 ntBASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 RN7SL752P-201ENST00000463779 287 ntBASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPAQ5VT25 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 LINC01115-203ENST00000606068 577 ntBASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 AL391256.1-201ENST00000443260 1855 ntBASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 RHOA-206ENST00000454011 889 ntTSL 2 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 MIR4321-201ENST00000592276 80 ntBASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 Six3os1_5.1-201ENST00000611000 271 ntBASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPAQ5VT25 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 MYCLP2-201ENST00000449268 967 ntBASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms