Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 PRYP5-201ENST00000451909 266 ntBASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 STK19B-204ENST00000512515 211 ntBASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 KRT126P-201ENST00000549467 1181 ntBASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 IFNL4P1-201ENST00000607083 540 ntBASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 AP001269.4-201ENST00000609611 512 ntBASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 AL355877.3-201ENST00000622820 899 ntBASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 AC092364.2-201ENST00000596710 2692 ntBASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 AC009336.1-201ENST00000608941 1553 ntBASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.6□□□□□ -0.07
ATPAF1Q5TC12 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 AL020989.1-201ENST00000422979 469 ntBASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 AL450487.1-201ENST00000426799 995 ntBASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 SAPCD2P3-201ENST00000455031 850 ntBASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 UNC93B7-201ENST00000509439 705 ntBASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 AC024909.3-201ENST00000611513 2257 ntBASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 AC079776.2-201ENST00000641154 1609 ntBASIC14.59□□□□□ -0.07
ATPAF1Q5TC12 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms