Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KCNA1Q09470 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNA1Q09470 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNA1Q09470 GGT4P-201ENST00000623672 1708 ntBASIC18.37■□□□□ 0.53
KCNA1Q09470 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.37■□□□□ 0.53
KCNA1Q09470 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNA1Q09470 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNA1Q09470 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.37■□□□□ 0.53
KCNA1Q09470 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNA1Q09470 PCDHB19P-201ENST00000570871 2371 ntBASIC18.37■□□□□ 0.53
KCNA1Q09470 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KCNA1Q09470 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 AC092364.2-201ENST00000596710 2692 ntBASIC18.36■□□□□ 0.53
KCNA1Q09470 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA1Q09470 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
KCNA1Q09470 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA1Q09470 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA1Q09470 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
KCNA1Q09470 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA1Q09470 RNU1-129P-201ENST00000384064 167 ntBASIC18.36■□□□□ 0.53
KCNA1Q09470 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA1Q09470 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
KCNA1Q09470 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.36■□□□□ 0.53
KCNA1Q09470 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA1Q09470 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA1Q09470 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KCNA1Q09470 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA1Q09470 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA1Q09470 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA1Q09470 PDPK2P-202ENST00000562415 1191 ntBASIC18.36■□□□□ 0.53
KCNA1Q09470 U1.21-201ENST00000580816 167 ntBASIC18.36■□□□□ 0.53
KCNA1Q09470 AC007064.4-201ENST00000637740 555 ntBASIC18.36■□□□□ 0.53
KCNA1Q09470 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
KCNA1Q09470 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA1Q09470 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA1Q09470 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
KCNA1Q09470 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA1Q09470 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.35■□□□□ 0.53
KCNA1Q09470 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
KCNA1Q09470 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA1Q09470 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KCNA1Q09470 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.35■□□□□ 0.53
KCNA1Q09470 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA1Q09470 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.35■□□□□ 0.53
KCNA1Q09470 HLA-J-202ENST00000469281 1241 ntBASIC18.35■□□□□ 0.53
KCNA1Q09470 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.35■□□□□ 0.53
KCNA1Q09470 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA1Q09470 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA1Q09470 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.35■□□□□ 0.53
KCNA1Q09470 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNA1Q09470 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.35■□□□□ 0.53
KCNA1Q09470 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KCNA1Q09470 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.35■□□□□ 0.53
KCNA1Q09470 AP001350.2-201ENST00000625104 1094 ntBASIC18.35■□□□□ 0.53
KCNA1Q09470 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA1Q09470 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
KCNA1Q09470 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
KCNA1Q09470 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA1Q09470 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA1Q09470 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA1Q09470 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KCNA1Q09470 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNA1Q09470 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNA1Q09470 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
KCNA1Q09470 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
KCNA1Q09470 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms