Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.64■□□□□ 0.41
UBE3AQ05086 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.64■□□□□ 0.41
UBE3AQ05086 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.64■□□□□ 0.41
UBE3AQ05086 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.64■□□□□ 0.41
UBE3AQ05086 AL132655.2-201ENST00000596276 594 ntBASIC17.64■□□□□ 0.41
UBE3AQ05086 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.64■□□□□ 0.41
UBE3AQ05086 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.64■□□□□ 0.41
UBE3AQ05086 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.64■□□□□ 0.41
UBE3AQ05086 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UBE3AQ05086 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.64■□□□□ 0.41
UBE3AQ05086 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.64■□□□□ 0.41
UBE3AQ05086 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 AC116353.5-201ENST00000638148 1699 ntBASIC17.64■□□□□ 0.41
UBE3AQ05086 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.64■□□□□ 0.41
UBE3AQ05086 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
UBE3AQ05086 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.64■□□□□ 0.41
UBE3AQ05086 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.63■□□□□ 0.41
UBE3AQ05086 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UBE3AQ05086 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.63■□□□□ 0.41
UBE3AQ05086 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.63■□□□□ 0.41
UBE3AQ05086 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
UBE3AQ05086 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UBE3AQ05086 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.63■□□□□ 0.41
UBE3AQ05086 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.63■□□□□ 0.41
UBE3AQ05086 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UBE3AQ05086 API5-211ENST00000534695 560 ntTSL 5 BASIC17.63■□□□□ 0.41
UBE3AQ05086 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.63■□□□□ 0.41
UBE3AQ05086 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.63■□□□□ 0.41
UBE3AQ05086 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.63■□□□□ 0.41
UBE3AQ05086 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.63■□□□□ 0.41
UBE3AQ05086 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
UBE3AQ05086 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 CROCCP1-201ENST00000426910 5675 ntBASIC17.63■□□□□ 0.41
UBE3AQ05086 AL391825.1-201ENST00000457671 1364 ntBASIC17.63■□□□□ 0.41
UBE3AQ05086 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBE3AQ05086 AC073439.1-201ENST00000624121 1774 ntBASIC17.63■□□□□ 0.41
UBE3AQ05086 AC007613.1-201ENST00000572811 2597 ntBASIC17.63■□□□□ 0.41
UBE3AQ05086 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UBE3AQ05086 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UBE3AQ05086 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 AC108860.2-201ENST00000562760 2183 ntBASIC17.62■□□□□ 0.41
UBE3AQ05086 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
UBE3AQ05086 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.62■□□□□ 0.41
UBE3AQ05086 ARSEP1-201ENST00000420443 635 ntBASIC17.62■□□□□ 0.41
UBE3AQ05086 HLA-V-201ENST00000429037 534 ntBASIC17.62■□□□□ 0.41
UBE3AQ05086 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 GPR53P-205ENST00000457298 1084 ntBASIC17.62■□□□□ 0.41
UBE3AQ05086 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.62■□□□□ 0.41
UBE3AQ05086 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.62■□□□□ 0.41
UBE3AQ05086 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.62■□□□□ 0.41
UBE3AQ05086 AC105021.1-202ENST00000570572 669 ntBASIC17.62■□□□□ 0.41
UBE3AQ05086 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
UBE3AQ05086 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
UBE3AQ05086 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.62■□□□□ 0.41
UBE3AQ05086 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.62■□□□□ 0.41
UBE3AQ05086 AC138969.3-201ENST00000546612 1459 ntBASIC17.62■□□□□ 0.41
UBE3AQ05086 AC138932.2-201ENST00000548268 1459 ntBASIC17.62■□□□□ 0.41
UBE3AQ05086 AC126755.4-201ENST00000549796 1459 ntBASIC17.62■□□□□ 0.41
UBE3AQ05086 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.62■□□□□ 0.41
UBE3AQ05086 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.62■□□□□ 0.41
UBE3AQ05086 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.62■□□□□ 0.41
UBE3AQ05086 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
UBE3AQ05086 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE3AQ05086 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBE3AQ05086 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms