Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
RBM3P98179 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
RBM3P98179 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC10.59□□□□□ -0.71
RBM3P98179 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC10.59□□□□□ -0.71
RBM3P98179 HACD1-201ENST00000326961 773 ntTSL 2 BASIC10.59□□□□□ -0.71
RBM3P98179 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
RBM3P98179 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC10.59□□□□□ -0.71
RBM3P98179 NIFKP9-201ENST00000419265 221 ntBASIC10.59□□□□□ -0.71
RBM3P98179 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC10.59□□□□□ -0.71
RBM3P98179 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC10.59□□□□□ -0.71
RBM3P98179 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC10.59□□□□□ -0.71
RBM3P98179 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC10.59□□□□□ -0.71
RBM3P98179 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
RBM3P98179 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
RBM3P98179 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
RBM3P98179 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC10.59□□□□□ -0.71
RBM3P98179 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 AL596087.1-201ENST00000400979 1969 ntBASIC10.59□□□□□ -0.71
RBM3P98179 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
RBM3P98179 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
RBM3P98179 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.59□□□□□ -0.71
RBM3P98179 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC10.58□□□□□ -0.71
RBM3P98179 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
RBM3P98179 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC10.58□□□□□ -0.72
RBM3P98179 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RBM3P98179 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC10.58□□□□□ -0.72
RBM3P98179 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC10.58□□□□□ -0.72
RBM3P98179 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
RBM3P98179 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC10.58□□□□□ -0.72
RBM3P98179 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
RBM3P98179 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC10.58□□□□□ -0.72
RBM3P98179 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC10.58□□□□□ -0.72
RBM3P98179 AC104390.1-201ENST00000555663 520 ntBASIC10.58□□□□□ -0.72
RBM3P98179 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC10.58□□□□□ -0.72
RBM3P98179 TK1-204ENST00000590430 683 ntTSL 3 BASIC10.58□□□□□ -0.72
RBM3P98179 KLF2-202ENST00000592003 564 ntTSL 3 BASIC10.58□□□□□ -0.72
RBM3P98179 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC10.58□□□□□ -0.72
RBM3P98179 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 AC130371.2-201ENST00000619443 611 ntBASIC10.58□□□□□ -0.72
RBM3P98179 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
RBM3P98179 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.58□□□□□ -0.72
RBM3P98179 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RBM3P98179 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC10.58□□□□□ -0.72
RBM3P98179 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.58□□□□□ -0.72
RBM3P98179 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RBM3P98179 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms