Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.3■□□□□ 0.04
CXCR4P61073 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.3■□□□□ 0.04
CXCR4P61073 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.3■□□□□ 0.04
CXCR4P61073 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
CXCR4P61073 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.3■□□□□ 0.04
CXCR4P61073 AC006011.2-201ENST00000621313 1158 ntBASIC15.3■□□□□ 0.04
CXCR4P61073 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CXCR4P61073 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CXCR4P61073 AC112504.1-201ENST00000623415 1841 ntBASIC15.29■□□□□ 0.04
CXCR4P61073 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 AC006277.1-201ENST00000624348 1610 ntBASIC15.29■□□□□ 0.04
CXCR4P61073 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.29■□□□□ 0.04
CXCR4P61073 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CXCR4P61073 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CXCR4P61073 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.29■□□□□ 0.04
CXCR4P61073 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.29■□□□□ 0.04
CXCR4P61073 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCR4P61073 AL138831.2-201ENST00000606564 490 ntBASIC15.29■□□□□ 0.04
CXCR4P61073 AC083849.1-201ENST00000615227 514 ntBASIC15.29■□□□□ 0.04
CXCR4P61073 AC124864.1-201ENST00000623408 392 ntBASIC15.29■□□□□ 0.04
CXCR4P61073 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CXCR4P61073 AC073912.3-201ENST00000624414 853 ntBASIC15.29■□□□□ 0.04
CXCR4P61073 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCR4P61073 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCR4P61073 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.29■□□□□ 0.04
CXCR4P61073 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CXCR4P61073 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCR4P61073 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CXCR4P61073 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CXCR4P61073 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CXCR4P61073 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCR4P61073 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.29■□□□□ 0.04
CXCR4P61073 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CXCR4P61073 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.28■□□□□ 0.04
CXCR4P61073 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.28■□□□□ 0.04
CXCR4P61073 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.28■□□□□ 0.04
CXCR4P61073 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CXCR4P61073 AC023157.3-201ENST00000619086 2088 ntBASIC15.28■□□□□ 0.04
CXCR4P61073 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.28■□□□□ 0.04
CXCR4P61073 AC097637.2-201ENST00000624096 1997 ntBASIC15.28■□□□□ 0.04
CXCR4P61073 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 FAM220CP-201ENST00000395253 831 ntBASIC15.28■□□□□ 0.04
CXCR4P61073 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.28■□□□□ 0.04
CXCR4P61073 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.28■□□□□ 0.04
CXCR4P61073 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.28■□□□□ 0.04
CXCR4P61073 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.28■□□□□ 0.04
CXCR4P61073 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.28■□□□□ 0.04
CXCR4P61073 AL592071.1-201ENST00000611956 408 ntBASIC15.28■□□□□ 0.04
CXCR4P61073 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.28■□□□□ 0.04
CXCR4P61073 AC066615.1-201ENST00000640911 628 ntBASIC15.28■□□□□ 0.04
CXCR4P61073 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.28■□□□□ 0.04
CXCR4P61073 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CXCR4P61073 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CXCR4P61073 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CXCR4P61073 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CXCR4P61073 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms