Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLDN2P57739 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN2P57739 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN2P57739 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN2P57739 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN2P57739 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN2P57739 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLDN2P57739 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CLDN2P57739 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN2P57739 FO538757.1-201ENST00000623083 1397 ntBASIC16.48■□□□□ 0.23
CLDN2P57739 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN2P57739 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN2P57739 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN2P57739 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN2P57739 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN2P57739 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN2P57739 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN2P57739 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLDN2P57739 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
CLDN2P57739 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN2P57739 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN2P57739 TREML5P-201ENST00000421694 576 ntBASIC16.47■□□□□ 0.23
CLDN2P57739 AC055876.3-201ENST00000431496 288 ntBASIC16.47■□□□□ 0.23
CLDN2P57739 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN2P57739 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.47■□□□□ 0.23
CLDN2P57739 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN2P57739 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.47■□□□□ 0.23
CLDN2P57739 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN2P57739 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN2P57739 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN2P57739 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN2P57739 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 AC138649.4-201ENST00000612222 287 ntBASIC16.47■□□□□ 0.23
CLDN2P57739 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN2P57739 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLDN2P57739 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLDN2P57739 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
CLDN2P57739 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN2P57739 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.46■□□□□ 0.23
CLDN2P57739 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CLDN2P57739 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN2P57739 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
CLDN2P57739 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN2P57739 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN2P57739 SPDYE7P-202ENST00000420373 878 ntBASIC16.46■□□□□ 0.23
CLDN2P57739 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN2P57739 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.46■□□□□ 0.23
CLDN2P57739 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN2P57739 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN2P57739 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.46■□□□□ 0.23
CLDN2P57739 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.46■□□□□ 0.23
CLDN2P57739 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN2P57739 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.46■□□□□ 0.23
CLDN2P57739 MIR4453-201ENST00000584019 89 ntBASIC16.46■□□□□ 0.23
CLDN2P57739 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN2P57739 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CLDN2P57739 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN2P57739 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN2P57739 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN2P57739 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN2P57739 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN2P57739 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN2P57739 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CLDN2P57739 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLDN2P57739 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN2P57739 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN2P57739 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CLDN2P57739 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN2P57739 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN2P57739 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN2P57739 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN2P57739 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms