Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.85■■□□□ 1.09
RIPK4P57078 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RIPK4P57078 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RIPK4P57078 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 AC079140.1-201ENST00000508039 487 ntBASIC21.85■■□□□ 1.09
RIPK4P57078 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.85■■□□□ 1.09
RIPK4P57078 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.85■■□□□ 1.09
RIPK4P57078 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RIPK4P57078 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RIPK4P57078 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.85■■□□□ 1.09
RIPK4P57078 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.85■■□□□ 1.09
RIPK4P57078 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
RIPK4P57078 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RIPK4P57078 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK4P57078 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.85■■□□□ 1.09
RIPK4P57078 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.84■■□□□ 1.09
RIPK4P57078 AL031731.1-201ENST00000642131 2094 ntBASIC21.84■■□□□ 1.09
RIPK4P57078 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC21.84■■□□□ 1.09
RIPK4P57078 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.84■■□□□ 1.09
RIPK4P57078 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
RIPK4P57078 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.84■■□□□ 1.09
RIPK4P57078 HLA-A-202ENST00000376806 1854 ntBASIC21.84■■□□□ 1.09
RIPK4P57078 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 AP000344.2-201ENST00000512987 629 ntBASIC21.84■■□□□ 1.09
RIPK4P57078 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.84■■□□□ 1.09
RIPK4P57078 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.84■■□□□ 1.09
RIPK4P57078 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.84■■□□□ 1.09
RIPK4P57078 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.84■■□□□ 1.09
RIPK4P57078 AC092171.3-201ENST00000610122 2651 ntBASIC21.84■■□□□ 1.09
RIPK4P57078 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.84■■□□□ 1.09
RIPK4P57078 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.84■■□□□ 1.09
RIPK4P57078 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK4P57078 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RIPK4P57078 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.83■■□□□ 1.09
RIPK4P57078 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.83■■□□□ 1.09
RIPK4P57078 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
RIPK4P57078 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK4P57078 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.83■■□□□ 1.09
RIPK4P57078 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK4P57078 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.83■■□□□ 1.09
RIPK4P57078 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RIPK4P57078 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.83■■□□□ 1.09
RIPK4P57078 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RIPK4P57078 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK4P57078 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK4P57078 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK4P57078 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK4P57078 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RIPK4P57078 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RIPK4P57078 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.83■■□□□ 1.08
RIPK4P57078 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.83■■□□□ 1.08
RIPK4P57078 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK4P57078 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RIPK4P57078 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.82■■□□□ 1.08
RIPK4P57078 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK4P57078 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
RIPK4P57078 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
RIPK4P57078 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.82■■□□□ 1.08
RIPK4P57078 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK4P57078 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK4P57078 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RIPK4P57078 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK4P57078 SPCS2P4-201ENST00000436160 681 ntBASIC21.82■■□□□ 1.08
RIPK4P57078 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.82■■□□□ 1.08
RIPK4P57078 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.82■■□□□ 1.08
RIPK4P57078 HLA-J-202ENST00000469281 1241 ntBASIC21.82■■□□□ 1.08
RIPK4P57078 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.82■■□□□ 1.08
RIPK4P57078 LINC01225-203ENST00000563550 1244 ntBASIC21.82■■□□□ 1.08
RIPK4P57078 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.82■■□□□ 1.08
RIPK4P57078 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
RIPK4P57078 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.82■■□□□ 1.08
RIPK4P57078 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK4P57078 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK4P57078 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK4P57078 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK4P57078 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
RIPK4P57078 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.81■■□□□ 1.08
RIPK4P57078 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms