Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHB4P54760 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB4P54760 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
EPHB4P54760 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHB4P54760 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
EPHB4P54760 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB4P54760 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
EPHB4P54760 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHB4P54760 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.83■□□□□ 0.61
EPHB4P54760 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
EPHB4P54760 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHB4P54760 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHB4P54760 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
EPHB4P54760 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHB4P54760 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB4P54760 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHB4P54760 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
EPHB4P54760 RBPMS2P1-201ENST00000437762 623 ntBASIC18.83■□□□□ 0.6
EPHB4P54760 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB4P54760 CRB3P1-201ENST00000449338 276 ntBASIC18.83■□□□□ 0.6
EPHB4P54760 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB4P54760 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB4P54760 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.83■□□□□ 0.6
EPHB4P54760 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.83■□□□□ 0.6
EPHB4P54760 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.83■□□□□ 0.6
EPHB4P54760 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB4P54760 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB4P54760 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHB4P54760 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHB4P54760 AC008677.1-201ENST00000519230 1561 ntBASIC18.83■□□□□ 0.6
EPHB4P54760 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHB4P54760 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB4P54760 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB4P54760 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB4P54760 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB4P54760 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB4P54760 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB4P54760 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB4P54760 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB4P54760 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB4P54760 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB4P54760 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.82■□□□□ 0.6
EPHB4P54760 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB4P54760 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHB4P54760 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHB4P54760 AC140658.5-201ENST00000438532 169 ntBASIC18.82■□□□□ 0.6
EPHB4P54760 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.82■□□□□ 0.6
EPHB4P54760 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHB4P54760 SLC25A6P2-201ENST00000497974 877 ntBASIC18.82■□□□□ 0.6
EPHB4P54760 IGHV3-52-201ENST00000519770 353 ntBASIC18.82■□□□□ 0.6
EPHB4P54760 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHB4P54760 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.82■□□□□ 0.6
EPHB4P54760 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB4P54760 AC140878.1-201ENST00000565277 250 ntBASIC18.82■□□□□ 0.6
EPHB4P54760 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.82■□□□□ 0.6
EPHB4P54760 CROCCP2-202ENST00000412962 2773 ntBASIC18.82■□□□□ 0.6
EPHB4P54760 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
EPHB4P54760 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB4P54760 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHB4P54760 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB4P54760 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB4P54760 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
EPHB4P54760 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB4P54760 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB4P54760 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
EPHB4P54760 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.81■□□□□ 0.6
EPHB4P54760 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.81■□□□□ 0.6
EPHB4P54760 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.81■□□□□ 0.6
EPHB4P54760 IGHV3-42-201ENST00000520410 361 ntBASIC18.81■□□□□ 0.6
EPHB4P54760 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.81■□□□□ 0.6
EPHB4P54760 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.81■□□□□ 0.6
EPHB4P54760 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.81■□□□□ 0.6
EPHB4P54760 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
EPHB4P54760 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.81■□□□□ 0.6
EPHB4P54760 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.81■□□□□ 0.6
EPHB4P54760 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.81■□□□□ 0.6
EPHB4P54760 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
EPHB4P54760 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.81■□□□□ 0.6
EPHB4P54760 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.81■□□□□ 0.6
EPHB4P54760 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHB4P54760 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms