Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PDX1P52945 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PDX1P52945 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.25■□□□□ 0.19
PDX1P52945 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PDX1P52945 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PDX1P52945 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.25■□□□□ 0.19
PDX1P52945 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PDX1P52945 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.25■□□□□ 0.19
PDX1P52945 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PDX1P52945 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PDX1P52945 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.25■□□□□ 0.19
PDX1P52945 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.25■□□□□ 0.19
PDX1P52945 AC069262.1-201ENST00000539058 672 ntBASIC16.25■□□□□ 0.19
PDX1P52945 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PDX1P52945 AC005412.3-201ENST00000580309 715 ntBASIC16.25■□□□□ 0.19
PDX1P52945 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.25■□□□□ 0.19
PDX1P52945 AC239800.4-201ENST00000603712 296 ntBASIC16.25■□□□□ 0.19
PDX1P52945 AP001059.3-201ENST00000619053 235 ntBASIC16.25■□□□□ 0.19
PDX1P52945 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.25■□□□□ 0.19
PDX1P52945 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 AC016396.2-201ENST00000562575 1417 ntBASIC16.25■□□□□ 0.19
PDX1P52945 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PDX1P52945 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PDX1P52945 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDX1P52945 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PDX1P52945 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
PDX1P52945 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
PDX1P52945 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.24■□□□□ 0.19
PDX1P52945 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PDX1P52945 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 PMS2P4-201ENST00000412466 1052 ntBASIC16.24■□□□□ 0.19
PDX1P52945 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PDX1P52945 LINC01225-203ENST00000563550 1244 ntBASIC16.24■□□□□ 0.19
PDX1P52945 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.24■□□□□ 0.19
PDX1P52945 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.24■□□□□ 0.19
PDX1P52945 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.24■□□□□ 0.19
PDX1P52945 AL009183.1-201ENST00000603760 355 ntBASIC16.24■□□□□ 0.19
PDX1P52945 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 AC022211.2-201ENST00000585075 2527 ntBASIC16.24■□□□□ 0.19
PDX1P52945 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.24■□□□□ 0.19
PDX1P52945 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.24■□□□□ 0.19
PDX1P52945 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDX1P52945 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PDX1P52945 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDX1P52945 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDX1P52945 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.23■□□□□ 0.19
PDX1P52945 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.23■□□□□ 0.19
PDX1P52945 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 AC055876.3-201ENST00000431496 288 ntBASIC16.23■□□□□ 0.19
PDX1P52945 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.23■□□□□ 0.19
PDX1P52945 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.23■□□□□ 0.19
PDX1P52945 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.23■□□□□ 0.19
PDX1P52945 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.23■□□□□ 0.19
PDX1P52945 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDX1P52945 AC138649.4-201ENST00000612222 287 ntBASIC16.23■□□□□ 0.19
PDX1P52945 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PDX1P52945 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.23■□□□□ 0.19
PDX1P52945 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDX1P52945 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms