Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC6A12P48065 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC6A12P48065 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC6A12P48065 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC6A12P48065 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC6A12P48065 AL031055.1-201ENST00000606362 631 ntBASIC16.12■□□□□ 0.17
SLC6A12P48065 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SLC6A12P48065 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC6A12P48065 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SLC6A12P48065 IL9RP2-201ENST00000423948 1312 ntBASIC16.12■□□□□ 0.17
SLC6A12P48065 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SLC6A12P48065 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A12P48065 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A12P48065 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 PCDH8P1-201ENST00000428983 2773 ntBASIC16.11■□□□□ 0.17
SLC6A12P48065 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC6A12P48065 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A12P48065 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC6A12P48065 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A12P48065 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A12P48065 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SLC6A12P48065 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A12P48065 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.11■□□□□ 0.17
SLC6A12P48065 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC6A12P48065 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC6A12P48065 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC6A12P48065 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A12P48065 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.11■□□□□ 0.17
SLC6A12P48065 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SLC6A12P48065 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC6A12P48065 AC026691.1-201ENST00000602502 2017 ntBASIC16.11■□□□□ 0.17
SLC6A12P48065 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A12P48065 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC6A12P48065 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC6A12P48065 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC6A12P48065 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC6A12P48065 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.1■□□□□ 0.17
SLC6A12P48065 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 RPL13AP23-201ENST00000480739 586 ntBASIC16.1■□□□□ 0.17
SLC6A12P48065 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC6A12P48065 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC6A12P48065 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 AC064836.3-201ENST00000607928 673 ntBASIC16.1■□□□□ 0.17
SLC6A12P48065 AC020765.3-201ENST00000613051 740 ntBASIC16.1■□□□□ 0.17
SLC6A12P48065 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms