Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRCC3P46736 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.74■□□□□ 0.43
BRCC3P46736 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.74■□□□□ 0.43
BRCC3P46736 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRCC3P46736 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRCC3P46736 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
BRCC3P46736 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRCC3P46736 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BRCC3P46736 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BRCC3P46736 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
BRCC3P46736 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 FOXO1B-201ENST00000504678 1527 ntBASIC17.73■□□□□ 0.43
BRCC3P46736 AP001094.4-201ENST00000579008 2176 ntBASIC17.73■□□□□ 0.43
BRCC3P46736 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.73■□□□□ 0.43
BRCC3P46736 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
BRCC3P46736 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
BRCC3P46736 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BRCC3P46736 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BRCC3P46736 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.73■□□□□ 0.43
BRCC3P46736 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.73■□□□□ 0.43
BRCC3P46736 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.73■□□□□ 0.43
BRCC3P46736 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCC3P46736 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCC3P46736 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BRCC3P46736 AC093214.1-201ENST00000511688 1107 ntBASIC17.73■□□□□ 0.43
BRCC3P46736 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.73■□□□□ 0.43
BRCC3P46736 AC105233.2-201ENST00000523697 349 ntBASIC17.73■□□□□ 0.43
BRCC3P46736 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCC3P46736 AF228730.5-201ENST00000530288 346 ntBASIC17.73■□□□□ 0.43
BRCC3P46736 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCC3P46736 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.73■□□□□ 0.43
BRCC3P46736 AC073389.1-201ENST00000595595 795 ntBASIC17.73■□□□□ 0.43
BRCC3P46736 AC092364.2-202ENST00000597012 1073 ntBASIC17.73■□□□□ 0.43
BRCC3P46736 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BRCC3P46736 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCC3P46736 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRCC3P46736 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRCC3P46736 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BRCC3P46736 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCC3P46736 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.72■□□□□ 0.43
BRCC3P46736 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.72■□□□□ 0.43
BRCC3P46736 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
BRCC3P46736 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BRCC3P46736 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BRCC3P46736 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.72■□□□□ 0.43
BRCC3P46736 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.72■□□□□ 0.43
BRCC3P46736 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BRCC3P46736 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BRCC3P46736 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.72■□□□□ 0.43
BRCC3P46736 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.72■□□□□ 0.43
BRCC3P46736 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.72■□□□□ 0.43
BRCC3P46736 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.72■□□□□ 0.43
BRCC3P46736 SPDYE7P-202ENST00000420373 878 ntBASIC17.72■□□□□ 0.43
BRCC3P46736 TREML5P-201ENST00000421694 576 ntBASIC17.72■□□□□ 0.43
BRCC3P46736 AC107890.1-201ENST00000422478 521 ntBASIC17.72■□□□□ 0.43
BRCC3P46736 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.72■□□□□ 0.43
BRCC3P46736 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.72■□□□□ 0.43
BRCC3P46736 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.72■□□□□ 0.43
BRCC3P46736 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.72■□□□□ 0.43
BRCC3P46736 PRYP6-201ENST00000514804 343 ntBASIC17.72■□□□□ 0.43
BRCC3P46736 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.72■□□□□ 0.43
BRCC3P46736 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.72■□□□□ 0.43
BRCC3P46736 AL096865.1-201ENST00000606796 927 ntBASIC17.72■□□□□ 0.43
BRCC3P46736 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.72■□□□□ 0.43
BRCC3P46736 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.72■□□□□ 0.43
BRCC3P46736 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.72■□□□□ 0.43
BRCC3P46736 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCC3P46736 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.71■□□□□ 0.43
BRCC3P46736 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms